Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs4792063 | chr17:7892082 | C/T | 0.000344 | 211 | 16.45 | 16.67 | 11.2 | KM Plot |
KIRP | rs4803520 | chr19:42500373 | A/G | 0.000314 | 214 | 11.2 | 17 | 15.1 | KM Plot |
KIRP | rs4810153 | chr20:37227108 | G/A | 4.44E-16 | 212 | 6.7 | 24.9 | 15.88 | KM Plot |
KIRP | rs4810154 | chr20:37227117 | A/G | 4.44E-16 | 212 | 6.7 | 24.9 | 15.88 | KM Plot |
KIRP | rs4810155 | chr20:37227120 | C/T | 4.44E-16 | 212 | 6.7 | 24.9 | 15.88 | KM Plot |
KIRP | rs4810156 | chr20:37227218 | G/A | 4.44E-16 | 212 | 6.7 | 24.9 | 15.88 | KM Plot |
KIRP | rs4810157 | chr20:37227276 | C/T | 4.44E-16 | 212 | 6.7 | 24.9 | 15.88 | KM Plot |
KIRP | rs4810158 | chr20:37227368 | G/A | 4.44E-16 | 212 | 6.7 | 24.9 | 15.88 | KM Plot |
KIRP | rs4812064 | chr20:37227391 | C/T | 4.44E-16 | 212 | 6.7 | 24.9 | 15.88 | KM Plot |
KIRP | rs4816237 | chr21:26071985 | G/A | 0.000527 | 214 | 10.83 | 17.13 | 17.75 | KM Plot |
KIRP | rs4816982 | chr21:26071887 | C/G | 0.000527 | 214 | 10.83 | 17.13 | 17.75 | KM Plot |
KIRP | rs4816983 | chr21:26071991 | C/A | 0.000527 | 214 | 10.83 | 17.13 | 17.75 | KM Plot |
KIRP | rs4816984 | chr21:26072111 | G/A | 0.000554 | 213 | 10.83 | 17.07 | 17.75 | KM Plot |
KIRP | rs4832254 | chr2:86429064 | G/T | 2.78E-6 | 211 | 11.43 | 13.63 | 16.73 | KM Plot |
KIRP | rs4855860 | chr3:49526044 | A/T | 2.65E-8 | 208 | 9 | 18.88 | 14.83 | KM Plot |